Dead Simple OWL Design Patterns

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Dead Simple OWL Design Patterns

Chris Mungall

Hi all,

There is a paper by David Osumi-Sutherland, Melanie Courtot, Jim Balhoff and myself out now in JBMS describing the "Dead Simple OWL Design Patterns" system (abbreviated DOSDPs, in a homage to OWL/WOL):
https://jbiomedsem.biomedcentral.com/articles/10.1186/s13326-017-0126-0

We're using this in GO, Monarch and Planteome and other projects to codify standards for developing subsets of ontologies, for example exposure or response to chemicals, transport of substances through cells, abnormalities of organs and body parts, etc.

Github repo: https://github.com/dosumis/dead_simple_owl_design_patterns/
Tools: https://github.com/balhoff/dosdp-tools

Some examples:


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